what do those 2 pins control? (im too lazy to look at the pinout)
basically matts car still retails the stock ecu in order to control
1. fuel pump activation (provide 12v to pump) - can easily be changed to be powered by the wolf by rewing the pump at the rear with a relay and letting the wolf earth the pump instead...
2. idle control, mitsu's require 4 aux ports to control idle... only the wolf plus can do this, the wolf matt has has 2 aux ports, therefor no idle control with the mitsu stuff.. you can upgrade to the xf t/b and get rid of idle control or install a mach valve to control idle (same valves used to bleed boost)
other than that, u can get rid of your ecu...
i also believe that the stock ecu will be providing power to your coils / ignition / cas etc etc.... (it was most likely wired in as a piggy back)
so it would be best to get another ecu to just save you the hassel of rewiring everything...